STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155615_01237Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_900155615_01178
Unannotated protein.
 
 
 0.905
GCA_900155615_02332
Unannotated protein.
  
  
  0.791
GCA_900155615_01338
Unannotated protein.
 
 
 0.756
GCA_900155615_02578
Unannotated protein.
 
    0.750
GCA_900155615_02009
Unannotated protein.
 
 
 0.745
GCA_900155615_00426
Unannotated protein.
 
 
  0.718
GCA_900155615_02210
Unannotated protein.
 
 
  0.703
GCA_900155615_00446
Unannotated protein.
  
 
  0.641
GCA_900155615_00834
Unannotated protein.
  
 
  0.635
GCA_900155615_00918
Unannotated protein.
   
 
 0.610
Your Current Organism:
Massilimaliae massiliensis
NCBI taxonomy Id: 1852384
Other names: CSUR P2963, M. massiliensis, Massilimalia massiliensis, Ruminococcaceae bacterium Marseille-P2963, strain Marseille-P2963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.