STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ59122.1Nicotinamidase-related amidase. (179 aa)    
Predicted Functional Partners:
argD
acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
       0.697
SDR20939.1
Amidase.
    
  0.471
SDR05821.1
Glycine/D-amino acid oxidase.
   
 
  0.459
SDR22573.1
D-amino-acid dehydrogenase.
   
 
  0.459
SDQ59144.1
Serine protease; Belongs to the peptidase S8 family.
  
    0.449
SDR16466.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.403
Your Current Organism:
Pseudoxanthomonas sp. CF125
NCBI taxonomy Id: 1855303
Other names: P. sp. CF125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.