STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH66493.1Uncharacterized conserved protein. (165 aa)    
Predicted Functional Partners:
SFH66529.1
Hypothetical protein.
 
     0.845
SFH66445.1
Protein of unknown function.
 
     0.823
SFH66477.1
Helix-turn-helix domain-containing protein.
 
     0.799
SFJ92858.1
Protein of unknown function.
 
     0.767
SFJ92710.1
Hypothetical protein.
 
     0.766
SFI60338.1
Uncharacterized conserved protein.
 
     0.765
SFH66458.1
Plasmid replication initiator protein.
 
     0.757
SFH66430.1
Conjugative transfer signal peptidase TraF.
 
     0.715
SFH66402.1
Type IV secretory pathway, VirD2 components (relaxase).
 
    0.703
SFH66371.1
Hypothetical protein.
 
     0.689
Your Current Organism:
Bradyrhizobium sp. Gha
NCBI taxonomy Id: 1855318
Other names: B. sp. Gha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.