STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED79498.1MarR family protein. (251 aa)    
Predicted Functional Partners:
SED79467.1
Putative adhesin.
 
     0.884
SEC03005.1
Putative adhesin.
 
     0.794
SED79425.1
ABC-2 type transport system permease protein.
       0.703
SED79454.1
ABC-2 type transport system ATP-binding protein.
       0.703
SEC11960.1
Ferredoxin-NADP reductase.
    
   0.666
SEC40995.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
   0.666
SEC87882.1
Ferredoxin-NADP reductase.
    
   0.666
SEE27295.1
Ferredoxin-NADP reductase.
    
   0.666
SED29707.1
Transcriptional regulator, TetR family.
 
     0.502
SEE14687.1
FBP C-terminal treble-clef zinc-finger.
  
     0.488
Your Current Organism:
Streptomyces sp. 22311
NCBI taxonomy Id: 1855347
Other names: S. sp. 2231.1, Streptomyces sp. 2231.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.