STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001984055_02900Unannotated protein. (431 aa)    
Predicted Functional Partners:
GCA_001984055_00035
Unannotated protein.
  
 0.998
GCA_001984055_04358
Unannotated protein.
  
 
 0.970
GCA_001984055_01903
Unannotated protein.
  
 0.955
GCA_001984055_00216
Unannotated protein.
  
 
 0.937
GCA_001984055_03237
Unannotated protein.
  
 
 0.911
GCA_001984055_05518
Unannotated protein.
  
 
 0.911
GCA_001984055_05969
Unannotated protein.
  
 
 0.911
GCA_001984055_05135
Unannotated protein.
  
 0.908
GCA_001984055_06637
Unannotated protein.
  
 0.908
GCA_001984055_01989
Unannotated protein.
  
  
 0.897
Your Current Organism:
Variovorax sp. KK3
NCBI taxonomy Id: 1855728
Other names: V. sp. KK3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.