STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THL1_1721Hydroxypyruvate isomerase; Belongs to the hyi family. (261 aa)    
Predicted Functional Partners:
THL1_1897
Tartronate semialdehyde reductase.
 
 0.966
THL1_1899
Glyoxylate carboligase; Belongs to the TPP enzyme family.
 
 
 0.959
THL1_2961
D-isomer specific 2-hydroxyacid dehydrogenase.
 
 
  0.931
THL1_1720
2-hydroxy-3-oxopropionate reductase.
 
 0.924
THL1_1898
Hydroxypyruvate isomerase; Belongs to the hyi family.
  
  
 
0.911
THL1_4798
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.911
THL1_1716
Phosphonate ABC transporter permease.
       0.571
THL1_1717
ABC transporter permease.
       0.571
phnC
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
       0.571
THL1_1719
Phosphonate ABC transporter substrate-binding protein.
       0.571
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
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