STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5FPD6_DACPDAmino acid transporter. (568 aa)    
Predicted Functional Partners:
M5GCY8_DACPD
Nudix hydrolase domain-containing protein.
    
  0.770
M5FQ31_DACPD
IGPS-domain-containing protein.
   
 
 0.644
M5FVP2_DACPD
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.516
M5G5V7_DACPD
3-dehydroquinate synthase.
   
 0.516
M5G1S3_DACPD
Aspartate aminotransferase.
   
 0.487
M5GCJ3_DACPD
ANK_REP_REGION domain-containing protein.
    
 0.485
M5FRU2_DACPD
PDT-domain-containing protein.
     
 0.453
M5FNV5_DACPD
Alpha-glucosidase.
    
  0.452
M5FP73_DACPD
Alpha amylase.
    
  0.452
M5FX58_DACPD
Alpha-amylase.
    
  0.452
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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