STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5G2H5_DACPDExonuclease RNase T and DNA polymerase III. (212 aa)    
Predicted Functional Partners:
M5G4R9_DACPD
Phosphotransferase KptA/Tpt1.
 
      0.889
M5G0C7_DACPD
Uncharacterized protein.
   
  
 0.703
M5FYB1_DACPD
Utp21-domain-containing protein.
   
    0.590
M5G2K6_DACPD
WD40 repeat-like protein.
   
    0.583
M5FVI7_DACPD
Puf family RNA-binding protein.
   
    0.544
M5G5K7_DACPD
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
    0.537
M5G299_DACPD
ML domain-containing protein.
 
      0.528
M5FTR6_DACPD
Uncharacterized protein.
   
  
 0.519
M5GC52_DACPD
tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.
 
 
    0.514
M5FQK9_DACPD
WD40 repeat-like protein.
   
    0.511
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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