M5GBL4_DACPD protein (Dacryopinax primogenitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M5GBL4_DACPD

ARM repeat-containing protein. (322 aa)

Predicted Functional Partners:

M5G4K6_DACPD

0.991

M5GC33_DACPD

0.991

M5GBL1_DACPD

0.990

M5G0C7_DACPD

0.989

M5GE01_DACPD

0.985

M5GCP9_DACPD

0.984

M5FTX6_DACPD

0.983

M5GBR0_DACPD

0.983

M5GA10_DACPD

0.982

M5GAE9_DACPD

0.982

Your Current Organism:

Dacryopinax primogenitus

NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M5FTX6_DACPD	M5G0C7_DACPD	M5FTX6	M5G0C7	Uncharacterized protein.	Uncharacterized protein.	0.989
M5FTX6_DACPD	M5G4K6_DACPD	M5FTX6	M5G4K6	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
M5FTX6_DACPD	M5GA10_DACPD	M5FTX6	M5GA10	Uncharacterized protein.	Ribosomal protein L24.	0.999
M5FTX6_DACPD	M5GAE9_DACPD	M5FTX6	M5GAE9	Uncharacterized protein.	Ribosomal protein L32e.	0.999
M5FTX6_DACPD	M5GBL1_DACPD	M5FTX6	M5GBL1	Uncharacterized protein.	Uncharacterized protein.	0.989
M5FTX6_DACPD	M5GBL4_DACPD	M5FTX6	M5GBL4	Uncharacterized protein.	ARM repeat-containing protein.	0.983
M5FTX6_DACPD	M5GBR0_DACPD	M5FTX6	M5GBR0	Uncharacterized protein.	Ribosomal protein L35Ae.	0.999
M5FTX6_DACPD	M5GC33_DACPD	M5FTX6	M5GC33	Uncharacterized protein.	60S ribosomal protein L5.	0.999
M5FTX6_DACPD	M5GCP9_DACPD	M5FTX6	M5GCP9	Uncharacterized protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
M5FTX6_DACPD	M5GE01_DACPD	M5FTX6	M5GE01	Uncharacterized protein.	Uncharacterized protein.	0.999
M5G0C7_DACPD	M5FTX6_DACPD	M5G0C7	M5FTX6	Uncharacterized protein.	Uncharacterized protein.	0.989
M5G0C7_DACPD	M5G4K6_DACPD	M5G0C7	M5G4K6	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.990
M5G0C7_DACPD	M5GA10_DACPD	M5G0C7	M5GA10	Uncharacterized protein.	Ribosomal protein L24.	0.989
M5G0C7_DACPD	M5GAE9_DACPD	M5G0C7	M5GAE9	Uncharacterized protein.	Ribosomal protein L32e.	0.989
M5G0C7_DACPD	M5GBL1_DACPD	M5G0C7	M5GBL1	Uncharacterized protein.	Uncharacterized protein.	0.997
M5G0C7_DACPD	M5GBL4_DACPD	M5G0C7	M5GBL4	Uncharacterized protein.	ARM repeat-containing protein.	0.989
M5G0C7_DACPD	M5GBR0_DACPD	M5G0C7	M5GBR0	Uncharacterized protein.	Ribosomal protein L35Ae.	0.989
M5G0C7_DACPD	M5GC33_DACPD	M5G0C7	M5GC33	Uncharacterized protein.	60S ribosomal protein L5.	0.993
M5G0C7_DACPD	M5GCP9_DACPD	M5G0C7	M5GCP9	Uncharacterized protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.991
M5G0C7_DACPD	M5GE01_DACPD	M5G0C7	M5GE01	Uncharacterized protein.	Uncharacterized protein.	0.990

page 1 of 6

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About