STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GDJ0_DACPDHTH TFE/IIEalpha-type domain-containing protein. (427 aa)    
Predicted Functional Partners:
M5FVD6_DACPD
TFIIE beta domain-containing protein.
   
 0.999
M5G769_DACPD
BSD domain-containing protein.
   
 0.997
M5G8R2_DACPD
DNA repair helicase rad25.
   
 0.997
M5FXZ3_DACPD
MAT1-domain-containing protein.
    
 0.996
M5G4B1_DACPD
CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.996
M5GCU6_DACPD
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
   
 0.996
M5GDH8_DACPD
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.996
M5GFF8_DACPD
Transcription factor Tfb4.
   
 0.996
M5GG19_DACPD
DNA repair helicase.
    
 0.996
M5G0G4_DACPD
Cyclin-like protein; Belongs to the cyclin family.
    
 0.995
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.