STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps27eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps27E); Belongs to the eukaryotic ribosomal protein eS27 family. (63 aa)    
Predicted Functional Partners:
rps17e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps17E).
 
 
 0.998
rps8
SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.
   
   0.998
rps15
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps15P).
   
   0.998
rpl44e
LSU ribosomal protein L44E; Binds to the 23S rRNA.
  
 
 0.997
rps24e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E).
   
 
 0.992
infB
Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (By similarity).
  
 
   0.990
rpl15e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E).
  
 
 0.988
rpl21e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl21E).
 
 
 0.988
rpl40e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl40E).
   
 
 0.986
rpl18e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl18E).
  
 
 0.986
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.