Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PF1185 | argF | PF1185 | PF0594 | Acetylornithine deacetylase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; (argE). | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | 0.920 |
| PF1185 | argG | PF1185 | PF0207 | Acetylornithine deacetylase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; (argE). | Argininosuccinate synthase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.944 |
| PF1185 | lysK | PF1185 | PF1686 | Acetylornithine deacetylase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; (argE). | Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.922 |
| PF1185 | lysY | PF1185 | PF1683 | Acetylornithine deacetylase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; (argE). | N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.580 |
| PF1535 | PF2044 | PF1535 | PF2044 | Alpha-glucan phosphorylase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | Glycogen synthase; Function Code: 3.2 Cell Envelope: Surface polysaccharides, lipopolysaccharides and antigens; (starch). | 0.992 |
| PF1535 | argF | PF1535 | PF0594 | Alpha-glucan phosphorylase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | 0.963 |
| PF2044 | PF1535 | PF2044 | PF1535 | Glycogen synthase; Function Code: 3.2 Cell Envelope: Surface polysaccharides, lipopolysaccharides and antigens; (starch). | Alpha-glucan phosphorylase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | 0.992 |
| PF2044 | argF | PF2044 | PF0594 | Glycogen synthase; Function Code: 3.2 Cell Envelope: Surface polysaccharides, lipopolysaccharides and antigens; (starch). | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | 0.996 |
| argF | PF1185 | PF0594 | PF1185 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Acetylornithine deacetylase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; (argE). | 0.920 |
| argF | PF1535 | PF0594 | PF1535 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Alpha-glucan phosphorylase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | 0.963 |
| argF | PF2044 | PF0594 | PF2044 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Glycogen synthase; Function Code: 3.2 Cell Envelope: Surface polysaccharides, lipopolysaccharides and antigens; (starch). | 0.996 |
| argF | argG | PF0594 | PF0207 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Argininosuccinate synthase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.997 |
| argF | carA | PF0594 | PF1713 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Carbamoyl-phosphate synthase, small (or glutamine) subunit; Function Code: 9.4 Purines, Pyrimidines, Nucleosides and Nucleotides: Pyrimidine ribonucleotide biosynthesis; (carA); Belongs to the CarA family. | 0.979 |
| argF | carB | PF0594 | PF1714 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Carbamoyl-phosphate synthase large chain (glutamine-hydrolysing); Function Code: 9.4 Purines, Pyrimidines, Nucleosides and Nucleotides: Pyrimidine ribonucleotide biosynthesis. | 0.991 |
| argF | cpkA | PF0594 | PF0676 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Carbamate kinase-like carbamoylphosphate synthetase; Carbamate kinase that plays a biosynthetic role in that it produces carbamoyl-phosphate. | 0.938 |
| argF | lysK | PF0594 | PF1686 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.943 |
| argF | lysY | PF0594 | PF1683 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.968 |
| argF | pyrC | PF0594 | PF0189 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.914 |
| argG | PF1185 | PF0207 | PF1185 | Argininosuccinate synthase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Acetylornithine deacetylase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; (argE). | 0.944 |
| argG | argF | PF0207 | PF0594 | Argininosuccinate synthase; Function Code: 1.4 Amino Acid Biosynthesis: Glutamate family; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline, which is a substrate for argininosuccinate synthetase, the enzyme involved in the final step in arginine biosynthesis. | 0.997 |
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