STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF0655Serine/threonine-protein kinase; Function Code: 16 Unknown:. (370 aa)    
Predicted Functional Partners:
PF1674
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
 0.892
PF0397
GTP-binding protein homologue; Function Code: 16 Unknown:.
  
 0.820
PF0484
GTP binding protein; Similar to translation elongation factor EF-Tu; Function Code: 13.6 Translation: translation factors.
  
 0.820
PF0654
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
     0.804
rpl40e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl40E).
   
 0.766
PF0670
RNase l inhibitor; Function Code: 10 Regulatory Functions: REGULATORY FUNCTIONS.
   
 0.678
PF1581
Rio1 protein, putative; Function Code: 16 Unknown:.
 
 
 0.648
PF0149
Putative alcohol dehydrogenase/reductase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides.
  
 0.633
PF0557
3-oxoacyl-[acyl-carrier protein] reductase; Function Code: 7.1 Fatty Acid and Phospholipid Metabolism: General; (fabG).
  
 0.633
PF1853
Glucose 1-dehydrogenase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides.
  
 0.633
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.