STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF0725Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. (130 aa)    
Predicted Functional Partners:
PF0726
Function Code: 16.4 Hypothetical.
       0.793
PF0724
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.662
PF0727
Function Code: 16.4 Hypothetical.
       0.551
PF1194
Transcriptional regulator (furr family); Function Code: 10 Regulatory Functions: REGULATORY FUNCTIONS.
  
    0.531
PF0723
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.494
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.