STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF1234Putative chitinase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. (345 aa)    
Predicted Functional Partners:
PF1233
Putative chitinase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides.
   
 0.997
PF0076
Endo-beta-1,3-glucanase; Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides.
 
   
 0.628
PF0528
Cobalt transport ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
  
    0.491
PF1905
Putative protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptide.
  
     0.454
PF0354
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
   
 0.429
PF1950
Xanthine-guanine phosphoribosyltransferase; Function Code: 9.5 Purines, Pyrimidines, Nucleosides and Nucleotides: Salvage of nucleosides and nucleotides; (gptA-2).
      
 0.424
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
Server load: low (28%) [HD]