STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF1473Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. (231 aa)    
Predicted Functional Partners:
PF1472
Aspartate/serine transaminase; Function Code: 1.3 Amino Acid Biosynthesis: Aspartate family.
 
     0.644
PF1632
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
     0.589
PF1981
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
   
 0.584
PF1498
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
   
 0.538
PF1580
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
   
 0.514
PF1022
Transcriptional regulatory protein, asnC family; Function Code: 10 Regulatory Functions: REGULATORY FUNCTIONS.
 
     0.498
PF1912
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
      
 0.444
PF2062
Function Code: 16.4 Hypothetical.
      
 0.444
PF0029
Function Code: 16.4 Hypothetical.
      
 0.443
PF0030
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
      
 0.443
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.