Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PF1570 | PF1974 | PF1570 | PF1974 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | 0.428 |
| PF1570 | psmA | PF1570 | PF1571 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.905 |
| PF1570 | rpl15e | PF1570 | PF0876 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E). | 0.835 |
| PF1570 | rrp4 | PF1570 | PF1569 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Hypothetical protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.888 |
| PF1570 | rrp41 | PF1570 | PF1568 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Ribonuclease ph (rph); Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.905 |
| PF1570 | rrp42 | PF1570 | PF1567 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Hypothetical protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.898 |
| PF1974 | PF1570 | PF1974 | PF1570 | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | 0.428 |
| PF1974 | pan | PF1974 | PF0115 | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | ATP-dependent 26S protease regulatory subunit; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promo [...] | 0.575 |
| PF1974 | psmA | PF1974 | PF1571 | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | Proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.798 |
| PF1974 | psmB1 | PF1974 | PF0159 | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | Proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.820 |
| PF1974 | psmB2 | PF1974 | PF1404 | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | Proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.571 |
| PF1974 | rpl15e | PF1974 | PF0876 | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E). | 0.560 |
| glpK | pan | PF2004 | PF0115 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | ATP-dependent 26S protease regulatory subunit; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promo [...] | 0.999 |
| glpK | psmA | PF2004 | PF1571 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | Proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.792 |
| glpK | psmB1 | PF2004 | PF0159 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | Proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.792 |
| glpK | psmB2 | PF2004 | PF1404 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | Proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.792 |
| pan | PF1974 | PF0115 | PF1974 | ATP-dependent 26S protease regulatory subunit; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promo [...] | Thermosome, single subunit; Function Code: 4.3 Cellular Processes: Chaperones; Belongs to the TCP-1 chaperonin family. | 0.575 |
| pan | glpK | PF0115 | PF2004 | ATP-dependent 26S protease regulatory subunit; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promo [...] | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.999 |
| pan | psmA | PF0115 | PF1571 | ATP-dependent 26S protease regulatory subunit; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promo [...] | Proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.942 |
| pan | psmB1 | PF0115 | PF0159 | ATP-dependent 26S protease regulatory subunit; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promo [...] | Proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.839 |
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