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gdhA protein (Pyrococcus furiosus) - STRING interaction network
"gdhA" - Glutamate dehydrogenase in Pyrococcus furiosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAGlutamate dehydrogenase (420 aa)    
Predicted Functional Partners:
PF1910
Oxidoreductase (476 aa)
   
  0.993
glnA
Glutamine synthetase i (439 aa)
   
 
  0.985
PF0522
Aspartate aminotransferase (390 aa)
   
 
  0.984
PF1852
Glutamate synthase subunit beta (357 aa)
   
  0.983
PF1702
Aspartate aminotransferase (345 aa)
   
 
  0.980
PF0202
Isocitrate dehydrogenase (400 aa)
     
  0.978
PF0754
2-keto acid-ferredoxin oxidoreductase subunit alpha (570 aa)
       
  0.970
gltA
Citrate synthase (377 aa)
   
 
  0.965
cpkA
Carbamate kinase-like carbamoyl phosphate synthetase; Carbamate kinase that plays a biosynthetic role in that it produces carbamoyl-phosphate (314 aa)
         
  0.945
PF1773
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (180 aa)
       
  0.917
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus, P. furiosus DSM 3638, Pyrococcus furiosus, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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