node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PF0239 | PF1862 | PF0239 | PF1862 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the UPF0147 family. | DNA-binding protein; Function Code: 11.1 Replication: DNA replication, restriction, modification, recombination and repair. | 0.542 |
PF0239 | albA | PF0239 | PF1881 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the UPF0147 family. | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.561 |
PF0512 | albA | PF0512 | PF1881 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.500 |
PF0512 | rpl18a | PF0512 | PF0376 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rplXA). | 0.753 |
PF0512 | rps24e | PF0512 | PF0253 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.753 |
PF1542 | albA | PF1542 | PF1881 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.658 |
PF1542 | radB | PF1542 | PF0021 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Recombinase; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. | 0.630 |
PF1542 | rps24e | PF1542 | PF0253 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.821 |
PF1831 | albA | PF1831 | PF1881 | Archaeal histone a1; Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation (in vitro). | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.867 |
PF1831 | rpl18a | PF1831 | PF0376 | Archaeal histone a1; Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation (in vitro). | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rplXA). | 0.820 |
PF1831 | rps24e | PF1831 | PF0253 | Archaeal histone a1; Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation (in vitro). | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.682 |
PF1862 | PF0239 | PF1862 | PF0239 | DNA-binding protein; Function Code: 11.1 Replication: DNA replication, restriction, modification, recombination and repair. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the UPF0147 family. | 0.542 |
PF1862 | albA | PF1862 | PF1881 | DNA-binding protein; Function Code: 11.1 Replication: DNA replication, restriction, modification, recombination and repair. | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.613 |
PF1882 | albA | PF1882 | PF1881 | Cell division control protein 48, aaa family; Function Code: 4.2 Cellular Processes: Cell division; (cdc48-2). | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.533 |
PF1882 | radB | PF1882 | PF0021 | Cell division control protein 48, aaa family; Function Code: 4.2 Cellular Processes: Cell division; (cdc48-2). | Recombinase; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. | 0.470 |
adkA | albA | PF1800 | PF1881 | Adenylate kinase (ATP-AMP transphosphorylase); Function Code: 9.2 Purines, Pyrimidines, Nucleosides and Nucleotides: Nucleotide and nucleoside interconversions; Belongs to the archaeal adenylate kinase family. | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | 0.614 |
albA | PF0239 | PF1881 | PF0239 | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the UPF0147 family. | 0.561 |
albA | PF0512 | PF1881 | PF0512 | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | 0.500 |
albA | PF1542 | PF1881 | PF1542 | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | 0.658 |
albA | PF1831 | PF1881 | PF1831 | Hypothetical protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. | Archaeal histone a1; Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation (in vitro). | 0.867 |