STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF1955Function Code: 16.4 Hypothetical. (71 aa)    
Predicted Functional Partners:
PF1954
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.848
fba
Possible 1,6-fructose biphosphate aldolase; Function Code: 6.7 Energy Metabolism: Glycolysis; Belongs to the DeoC/FbaB aldolase family.
       0.548
PF1957
Agmatinase; Function Code: 5.3 Central Intermediary Metabolism: Polyamine biosynthesis; (speB); Belongs to the arginase family.
       0.547
PF1958
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.547
apgM
Phosphonopyruvate decarboxylase bcpc; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.445
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.