Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| eif2a | rpl10e | PF1140 | PF1279 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | 0.560 |
| eif2a | rpl15e | PF1140 | PF0876 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E). | 0.686 |
| eif2a | rpl21e | PF1140 | PF1035 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl21E). | 0.714 |
| eif2a | rpl31e | PF1140 | PF0378 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl31E). | 0.519 |
| eif2a | rpl44e | PF1140 | PF0217 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | LSU ribosomal protein L44E; Binds to the 23S rRNA. | 0.840 |
| eif2a | rps15 | PF1140 | PF2056 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps15P). | 0.999 |
| eif2a | rps24e | PF1140 | PF0253 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.999 |
| eif2a | rps6e | PF1140 | PF0488 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps6E). | 0.999 |
| eif2a | vapC | PF1140 | PF1205 | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.494 |
| ndk | rpl10e | PF0931 | PF1279 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | 0.770 |
| ndk | rpl15e | PF0931 | PF0876 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E). | 0.458 |
| ndk | rpl21e | PF0931 | PF1035 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl21E). | 0.526 |
| ndk | rps15 | PF0931 | PF2056 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps15P). | 0.999 |
| ndk | rps24e | PF0931 | PF0253 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.453 |
| ndk | rps6e | PF0931 | PF0488 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps6E). | 0.645 |
| rpl10e | eif2a | PF1279 | PF1140 | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | Translation initiation factor eIF-2, subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | 0.560 |
| rpl10e | ndk | PF1279 | PF0931 | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.770 |
| rpl10e | rpl15e | PF1279 | PF0876 | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E). | 0.998 |
| rpl10e | rpl21e | PF1279 | PF1035 | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl21E). | 0.998 |
| rpl10e | rpl31e | PF1279 | PF0378 | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl31E). | 0.995 |
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