STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104675_03079Unannotated protein. (152 aa)    
Predicted Functional Partners:
GCA_900104675_01946
Unannotated protein.
    
  0.866
GCA_900104675_01992
Unannotated protein.
   
 
 0.843
GCA_900104675_01050
Unannotated protein.
  
 
 0.719
GCA_900104675_01048
Unannotated protein.
    
 0.630
GCA_900104675_03526
Unannotated protein.
     
 0.470
GCA_900104675_02902
Unannotated protein.
   
 
 0.456
GCA_900104675_02523
Unannotated protein.
    
  0.421
GCA_900104675_00764
Unannotated protein.
    
 0.404
Your Current Organism:
Angelakisella massiliensis
NCBI taxonomy Id: 1871018
Other names: A. massiliensis, CSUR P3217, Ruminococcus sp. Marseille-P3217, strain Marseille-P3217
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.