STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900148495_00801Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_900148495_00802
Unannotated protein.
  
  
 0.994
GCA_900148495_00803
Unannotated protein.
 
  
 0.979
GCA_900148495_00807
Unannotated protein.
 
  
 0.977
GCA_900148495_00808
Unannotated protein.
 
  
 0.961
GCA_900148495_00804
Unannotated protein.
 
  
 0.959
GCA_900148495_00805
Unannotated protein.
 
  
 0.948
GCA_900148495_01280
Unannotated protein.
  
  
 0.891
GCA_900148495_02179
Unannotated protein.
  
   
 0.870
GCA_900148495_01392
Unannotated protein.
  
  
 0.861
GCA_900148495_02532
Unannotated protein.
  
   
 0.841
Your Current Organism:
Negativibacillus massiliensis
NCBI taxonomy Id: 1871035
Other names: CSUR P3213, DSM 103594, N. massiliensis, Ruminococcus sp. Marseille-P3213, strain Marseille-P3213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.