STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0240KEGG: xac:XAC3140 hypothetical protein. (278 aa)    
Predicted Functional Partners:
Mlg_0242
PFAM: TolB, N-terminal domain protein; WD40 domain protein beta Propeller; KEGG: noc:Noc_0145 TolB.
 
  
 0.951
Mlg_0241
PFAM: OmpA/MotB domain protein; KEGG: noc:Noc_0146 OmpA/MotB.
 
  
 0.925
Mlg_0245
Cell division and transport-associated protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mca:MCA1226 TolQ protein; TC 2.C.1.2.1.
 
  
 0.819
Mlg_0244
Cell division and transport-associated protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ilo:IL1082 biopolymer transport protein; TC 2.C.1.2.1.
 
  
 0.800
Mlg_2397
PFAM: WD40 domain protein beta Propeller; KEGG: gsu:GSU0025 tolB protein.
 
  
 0.776
Mlg_0175
TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: csa:Csal_1548 rare lipoprotein A.
 
 
 
 0.764
Mlg_0243
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: noc:Noc_0144 TonB-like; TC 2.C.1.2.1.
 
   
 0.686
Mlg_2284
Hypothetical protein; KEGG: cbu:CBU_1451 peptidyl-prolyl cis-trans isomerse D - related protein.
 
    0.676
Mlg_0445
TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: csa:Csal_0408 SecE subunit of protein translocation complex.
  
    0.621
Mlg_0156
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_1987 TPR repeat protein.
  
  
 0.615
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.