STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0400TIGRFAM: leucyl-tRNA synthetase; KEGG: csa:Csal_2344 leucyl-tRNA synthetase. (864 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
0.991
Mlg_0763
KEGG: mca:MCA0698 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.982
Mlg_0852
TIGRFAM: isoleucyl-tRNA synthetase; KEGG: mca:MCA2253 isoleucyl-tRNA synthetase.
 
0.944
Mlg_0539
TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: csa:Csal_2139 prolyl-tRNA synthetase.
 
 0.904
Mlg_0555
TIGRFAM: valyl-tRNA synthetase; KEGG: mca:MCA2097 valyl-tRNA synthetase.
  
 
0.893
Mlg_1481
alanyl-tRNA synthetase; KEGG: noc:Noc_0926 alanine--tRNA ligase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase, class IIc; phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD.
 
 
 0.881
Mlg_0401
KEGG: dar:Daro_0543 rare lipoprotein B.
  
  
 0.872
Mlg_2774
KEGG: mca:MCA3089 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase.
  
 0.850
Mlg_1302
TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: mca:MCA1234 glutamyl-tRNA synthetase.
  
 0.840
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mca:MCA0301 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 0.808
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
Server load: high (86%) [HD]
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