STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0498PFAM: copper resistance D domain protein; KEGG: pha:PSHAb0008 putative copper export protein. (300 aa)    
Predicted Functional Partners:
Mlg_0497
PFAM: copper resistance protein CopC; KEGG: ilo:IL1233 putative copper resistance protein.
 
  
 0.967
Mlg_0495
PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2765 outer membrane efflux protein.
 
     0.805
Mlg_0496
PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: bur:Bcep18194_B2764 multicopper oxidase, type 3.
 
   
 0.725
Mlg_0078
PFAM: transcriptional activator domain; KEGG: sme:SMa1591 putative adenylate cyclase.
  
     0.588
Mlg_0499
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: cef:CE0257 putative restriction enzyme subunit M.
       0.576
Mlg_0500
PFAM: restriction modification system DNA specificity domain; KEGG: mth:MTH941 type I restriction modification system, subunit S.
       0.576
Mlg_0107
PFAM: VanZ family protein; KEGG: nmu:Nmul_A2514 VanZ like protein.
  
     0.545
Mlg_0156
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_1987 TPR repeat protein.
  
     0.512
Mlg_0325
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dge:Dgeo_0089 ATPase, P type cation/copper-transporter.
     
 0.483
Mlg_0501
KEGG: mhu:Mhun_2961 protein of unknown function DUF262.
       0.473
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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