STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0806TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: hch:HCH_06248 glutamate-1-semialdehyde-2,1-aminomutase. (429 aa)    
Predicted Functional Partners:
Mlg_2828
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: noc:Noc_2574 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.993
Mlg_0279
PFAM: glutamyl-tRNA reductase; Shikimate/quinate 5-dehydrogenase; KEGG: noc:Noc_0510 glutamyl-tRNA reductase.
 
 0.989
Mlg_2670
Hydroxymethylbilane synthase; KEGG: vvy:VV0081 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase.
  
 0.959
Mlg_0131
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2036 non-ribosomal peptide synthase, amino acid adenylation domain.
 
  
 0.907
Mlg_1422
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: ppr:PBPRA1194 putative malonyl Coa-acyl carrier protein transacylase.
    
 0.864
Mlg_0125
PFAM: AMP-dependent synthetase and ligase; KEGG: nmu:Nmul_A2670 AMP-dependent synthetase and ligase.
 
  
 0.798
Mlg_1679
Precorrin-2 dehydrogenase / uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_0652 uroporphyrin-III C-methyltransferase.
   
 0.763
Mlg_2067
Thiamine-phosphate diphosphorylase; KEGG: tbd:Tbd_2556 thiamine monophosphate synthase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase.
    
 0.722
Mlg_2765
KEGG: sde:Sde_2681 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D).
 
  
 0.712
Mlg_2669
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: neu:NE0591 uroporphyrinogen III synthase HEM4.
 
  
 0.668
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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