STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1013Serine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mag:amb0187 serine phosphatase RsbU. (556 aa)    
Predicted Functional Partners:
Mlg_1011
KEGG: mag:amb3449 hypothetical protein.
 
    0.960
Mlg_1010
KEGG: mag:amb3448 hypothetical protein.
 
  
 0.958
Mlg_2416
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pae:PA3347 hypothetical protein.
 
 
 0.951
Mlg_0901
KEGG: hch:HCH_04474 muramidase (flagellum-specific); TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
   
    0.896
Mlg_1012
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mag:amb4415 FOG: GGDEF domain.
 
    0.859
Mlg_0665
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: cvi:CV1033 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
  
 0.843
Mlg_0975
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: hch:HCH_05181 flagellar motor switch protein FliM.
  
    0.779
Mlg_0074
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
  
 0.766
Mlg_0710
PFAM: flagellar motor switch protein FliG; KEGG: xcb:XC_2261 flagellar protein.
  
    0.764
Mlg_0893
TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: noc:Noc_2378 flagellar basal-body rod protein FlgB.
   
    0.745
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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