STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1081PFAM: NosL family protein; KEGG: pae:PA3396 NosL protein. (181 aa)    
Predicted Functional Partners:
Mlg_1075
PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: pae:PA3393 NosD protein.
 
 
 0.983
Mlg_1077
KEGG: hch:HCH_03385 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.982
Mlg_1073
PFAM: FMN-binding domain protein; KEGG: hch:HCH_03389 regulator of nitric oxide reductase transcription.
 
  
 0.937
Mlg_1076
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4734 copper ABC transporter, ATP-binding protein.
 
 
 0.932
Mlg_1074
KEGG: hch:HCH_03388 nitrous oxide reductase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: cytochrome c oxidase, subunit II.
 
  
 0.909
Mlg_0106
KEGG: nmu:Nmul_A2513 hypothetical protein.
  
 
 0.758
Mlg_1080
Hypothetical protein.
       0.701
Mlg_2120
PFAM: von Willebrand factor, type A; KEGG: noc:Noc_1847 nitric oxide reductase activation protein.
 
    0.636
Mlg_2646
KEGG: noc:Noc_2645 ABC transporter, permease protein, putative.
  
 
 0.630
Mlg_1078
PFAM: NosL family protein; KEGG: pae:PA3396 NosL protein.
 
    
0.624
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.