STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1589High potential iron-sulfur protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: High potential iron-sulfur protein; KEGG: rso:RSc3086 probable high potential iron-sulfur (hipip) signal peptide protein. (108 aa)    
Predicted Functional Partners:
Mlg_1590
KEGG: pae:PA1040 hypothetical protein.
       0.469
Mlg_1588
High potential iron-sulfur protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: High potential iron-sulfur protein; KEGG: rso:RSc3086 probable high potential iron-sulfur (hipip) signal peptide protein.
 
    
0.450
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.