STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1851KEGG: pfo:Pfl_1114 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase, family 19. (382 aa)    
Predicted Functional Partners:
Mlg_1852
TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: noc:Noc_0819 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase.
 
  
 0.994
Mlg_1434
KEGG: csa:Csal_1587 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase.
  
 0.993
Mlg_1850
RNase HII; PFAM: ribonuclease HII/HIII; KEGG: sdy:SDY_0199 RNAse HII.
 
  
 0.992
Mlg_2721
TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; KEGG: pfo:Pfl_1111 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD.
 
 
 0.989
Mlg_1812
TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: xac:XAC1036 UDP-2,3-diacylglucosamine hydrolase.
 
  
 0.961
Mlg_1853
TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: nmu:Nmul_A0667 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ.
 
  
 0.913
Mlg_2037
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: dar:Daro_0538 methylated-DNA-(protein)-cysteine S-methyltransferase.
      0.879
Mlg_2186
PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: ppu:PP1343 UDP-3-0-acyl N-acetylglucosamine deacetylase.
 
   
 0.866
Mlg_2225
KpsF/GutQ family protein; KEGG: noc:Noc_2788 sugar phosphate isomerase involved in capsule formation, KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS).
 
   
 0.865
Mlg_2637
PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: csa:Csal_0018 three-deoxy-D-manno-octulosonic-acid transferase-like protein.
 
   
 0.863
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.