STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1896PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: noc:Noc_0841 hypothetical protein. (404 aa)    
Predicted Functional Partners:
Mlg_1895
PFAM: FAD linked oxidase domain protein; KEGG: csa:Csal_2688 FAD linked oxidase-like protein.
 
 0.997
Mlg_1894
PFAM: FAD linked oxidase domain protein; KEGG: psb:Psyr_3331 glycolate oxidase subunit GlcD.
 
 0.996
Mlg_1646
KEGG: hch:HCH_01653 malate synthase G; TIGRFAM: malate synthase G; PFAM: malate synthase.
  
 
 0.919
Mlg_2682
PFAM: isocitrate lyase and phosphorylmutase; KEGG: pae:PA2634 probable isocitrate lyase.
     
 0.908
Mlg_1400
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ppu:PP0762 glycerate dehydrogenase.
    
 0.906
Mlg_2251
TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csa:Csal_2324 phosphoglycolate phosphatase.
    
 0.900
Mlg_2281
TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA3917 putative iron-sulfur binding protein.
 
 
 0.832
Mlg_2280
PFAM: protein of unknown function DUF162; KEGG: dar:Daro_0673 protein of unknown function DUF162.
 
 
 0.724
Mlg_1897
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: noc:Noc_0191 thiosulfate sulfurtransferase.
     
 0.559
Mlg_0307
4-phosphoerythronate dehydrogenase (FAD-dependent); PFAM: FAD linked oxidase domain protein; KEGG: mag:amb3713 FAD/FMN-containing dehydrogenase.
  
 0.551
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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