STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2076PFAM: OmpA/MotB domain protein; KEGG: csa:Csal_1504 OmpA/MotB. (251 aa)    
Predicted Functional Partners:
Mlg_2075
PFAM: MotA/TolQ/ExbB proton channel; KEGG: csa:Csal_1505 MotA/TolQ/ExbB proton channel.
 
 0.997
Mlg_1397
PFAM: MotA/TolQ/ExbB proton channel; KEGG: noc:Noc_0833 flagellar motor protein.
 
 0.991
Mlg_1505
KEGG: rso:RSp1411 probable chemotaxis (motility protein A) transmembrane.
  
 0.947
Mlg_0359
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: noc:Noc_0126 CheA signal transduction histidine kinase.
  
  
 0.911
Mlg_1118
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; PAS fold-4 domain protein; KEGG: gme:Gmet_0780 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
 
  
 0.906
Mlg_0891
PFAM: response regulator receiver; CheW domain protein; KEGG: pae:PA3349 probable chemotaxis protein.
  
  
 0.837
Mlg_0712
Flagellar protein export ATPase FliI; KEGG: noc:Noc_2356 flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase.
 
  
 0.801
Mlg_0710
PFAM: flagellar motor switch protein FliG; KEGG: xcb:XC_2261 flagellar protein.
 
  
 0.792
Mlg_0894
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cps:CPS_1478 flagellar basal-body rod protein FlgC.
 
  
 0.789
Mlg_0978
TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: pha:PSHAa0802 flagellar biosynthesis.
 
  
 0.775
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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