STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2338PFAM: glycosyl transferase, group 1; KEGG: par:Psyc_0667 probable glycosyl transferase, group 1. (359 aa)    
Predicted Functional Partners:
Mlg_2339
KEGG: reu:Reut_B5373 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase.
 
    0.815
Mlg_2341
PFAM: glycosyl transferase, group 1; KEGG: csa:Csal_1721 glycosyl transferase, group 1.
 
     0.808
Mlg_2340
Conserved hypothetical protein; KEGG: tel:tll1203 unknown protein.
  
  
 0.784
Mlg_0958
KEGG: noc:Noc_0904 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain.
   
 0.568
Mlg_2337
PFAM: Integrase, catalytic region; KEGG: dsy:DSY4578 hypothetical protein.
  
    0.455
Mlg_2336
KEGG: sdn:Sden_2169 hypothetical protein.
       0.448
Mlg_2801
PFAM: glycosyl transferase, family 2; KEGG: pfo:Pfl_2033 hypothetical protein.
 
   0.436
Mlg_2320
KEGG: eba:ebA2275 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related.
  
  
 0.410
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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