STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2436KEGG: xcv:XCV0403 biotin synthase BioB; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB. (337 aa)    
Predicted Functional Partners:
Mlg_0292
KEGG: pae:PA0504 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase.
 
 0.998
Mlg_2435
KEGG: mca:MCA1126 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II.
  
 0.992
Mlg_0362
Aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: hch:HCH_01529 adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
  
 0.991
Mlg_2433
TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_0322 biotin biosynthesis protein BioC.
 
  
 0.983
Mlg_0440
TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; KEGG: xcb:XC_4026 biotin acetyl-CoA-carboxylase synthetase.
  
 
 0.976
Mlg_2434
Carboxylesterase BioH (pimeloyl-CoA synthesis); PFAM: alpha/beta hydrolase fold; KEGG: xcb:XC_0397 biotin biosynthesis protein.
 
  
 0.887
Mlg_0491
PFAM: aminotransferase class-III; KEGG: sco:SCO7034 putative aminotransferase (fragment).
 
    
 0.710
Mlg_1102
KEGG: mca:MCA2079 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III.
 
 
  
 0.682
Mlg_1160
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; thiamineS protein; MoeZ/MoeB domain protein; KEGG: xcv:XCV2074 molybdopterin biosynthesis protein MoeB.
     
 0.652
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
      
 0.634
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.