STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2840KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)    
Predicted Functional Partners:
Mlg_1972
PFAM: triosephosphate isomerase; KEGG: dar:Daro_0947 triosephosphate isomerase.
 0.997
Mlg_2842
PFAM: phosphoglycerate kinase; KEGG: noc:Noc_2806 phosphoglycerate kinase.
 0.995
Mlg_2844
KEGG: noc:Noc_2804 fructose-bisphosphate aldolase, class II, calvin cycle subtype; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase, class-II.
  
 0.974
Mlg_2261
Transketolase; KEGG: noc:Noc_2808 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region.
  
 0.942
Mlg_2841
Transketolase; KEGG: noc:Noc_2808 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region.
  
 0.942
Mlg_0290
PFAM: phosphoglucose isomerase (PGI); KEGG: pca:Pcar_2367 glucose-6-phosphate isomerase.
  
 
 0.931
Mlg_2089
PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: csa:Csal_0375 fructose-bisphosphate aldolase.
    
 0.914
Mlg_1514
KEGG: csa:Csal_1568 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase.
  
  
 
0.913
Mlg_2260
KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase.
  
  
 
0.901
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
 
 
 0.883
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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