STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2881TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; GTP-binding; PFAM: GTP-binding protein, HSR1-related; KEGG: vpa:VP0002 thiophene and furan oxidation protein ThdF. (444 aa)    
Predicted Functional Partners:
Mlg_2880
TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; KEGG: noc:Noc_3085 glucose-inhibited division protein A.
 
 0.992
Mlg_2879
16S rRNA m(7)G-527 methyltransferase; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase small; Methyltransferase type 12; KEGG: noc:Noc_3084 glucose inhibited division protein.
  
  
 0.954
Mlg_2882
Protein translocase subunit yidC; PFAM: 60 kDa inner membrane insertion protein; KEGG: mfa:Mfla_2758 60 kDa inner membrane insertion protein.
 
  
 0.943
Mlg_2857
Cell division checkpoint GTPase YihA; TIGRFAM: GTP-binding; PFAM: GTP-binding protein, HSR1-related; KEGG: csa:Csal_3117 GTP-binding protein, HSR1-related.
  
 
 
 0.887
rplO
LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
  
 
 
 0.861
rplQ
PFAM: ribosomal protein L17; KEGG: ilo:IL1890 ribosomal protein L17.
  
 
   0.847
Mlg_1451
PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PP-loop domain protein; KEGG: bps:BPSL2889 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
 
 0.841
Mlg_0845
PFAM: ribosomal protein L21; KEGG: vvy:VV0470 ribosomal protein L21.
   
 
 0.839
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.838
Mlg_2883
TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mca:MCA3035 ribonuclease P protein component.
  
  
 0.833
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.