STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_1067Acetyltransferase; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)); Belongs to the SepCysS family. (377 aa)    
Predicted Functional Partners:
sepS
phenylalanyl-tRNA synthetase alpha subunit; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys).
  
 0.999
MTH_1195
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:H64484 AC:H64484, p()=2.1E-24, pid=31%.
    
 
 0.879
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
      
 0.784
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec); Belongs to the class-II aminoacyl-tRNA synthetase family. Type-2 seryl-tRNA synthetase subfamily.
  
   
 0.780
MTH_1068
Conserved protein; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family.
       0.779
MTH_1069
Pyruvate formate lyase activating protein; Function Code:1.08 - Pyruvate and acetyl-CoA metabolism; similar to, gp:GI:g1016358, p()=6.3E-80, pid=48%.
       0.774
MTH_1070
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:H64328 AC:H64328, p()=2.9E-52, pid=31%.
       0.744
MTH_1072
Hydrogenase expression/formation protein HypD; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:A64424 AC:A64424, p()=1.9E-85, pid=47%.
       0.744
MTH_1071
Conserved protein; Catalyzes the dephosphorylation of 2-phosphoglycolate.
       0.743
trkA
TRK system potassium uptake protein TrkA; Part of a potassium transport system.
   
    0.697
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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