STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV28524.1Non-heme chloroperoxidase. (333 aa)    
Predicted Functional Partners:
SFV31569.1
Hypothetical protein.
   
  0.780
SFV33618.1
Hypothetical protein.
   
  0.780
SFV29261.1
Bis(5'nucleosyl)-tetraphosphatase, ApaH.
    
  0.765
SFV26304.1
3-hydroxyacyl-CoA dehydrogenase.
    
 0.750
SFV27559.1
Short chain enoyl-CoA hydratase.
    
 0.750
SFV28959.1
SSU ribosomal protein S10P.
    
  0.750
SFV33831.1
Dihydrolipoamide dehydrogenase.
    
 0.741
SFV35498.1
Superoxide dismutase, Fe-Mn family.
   
  0.739
SFV30636.1
Hypothetical protein.
  
 
  0.737
SFV26543.1
DSF synthase.
    
  0.734
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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