STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ13738.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (238 aa)    
Predicted Functional Partners:
SDJ13715.1
Glucokinase.
      0.824
SDI85998.1
Cysteine desulfurase family protein, VC1184 subfamily.
    
   0.814
SDJ04130.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.814
SDJ04363.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.814
SDJ21046.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.814
SDJ12758.1
PAP2 superfamily protein.
 
    0.657
SDI86128.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.611
SDI86573.1
Protein of unknown function.
   
  
 0.575
SDJ03887.1
Alpha-galactosidase.
  
  
  0.547
SDJ18868.1
PAP2 superfamily protein.
 
    0.545
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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