STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Belongs to the xylose isomerase family. (396 aa)    
Predicted Functional Partners:
xylB
Xylulokinase.
 
 
 0.997
SDJ35893.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
  
 0.905
SDJ35761.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
    
 0.823
SDJ35820.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  
 0.795
SDJ11997.1
Beta-galactosidase.
    
 0.751
SDJ26088.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
    
 0.742
SDI87126.1
Xylitol oxidase.
  
  
  0.696
SDJ00695.1
Broad-specificity cellobiase.
    
 0.678
SDJ03037.1
Threonine dehydrogenase.
     
 0.678
SDJ16886.1
Broad-specificity cellobiase; Belongs to the glycosyl hydrolase 1 family.
    
 0.678
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.