STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ53152.1Subtilase family protein. (535 aa)    
Predicted Functional Partners:
SDJ43703.1
Type VII secretion protein EccB.
   
 0.801
recR
DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
    0.780
SDJ53176.1
Hypothetical protein.
       0.773
SDJ53213.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.642
SDI90252.1
FtsK/SpoIIIE family protein.
  
 
 0.464
SDI95598.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.464
SDJ43115.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.464
SDJ53227.1
N-acetylmuramoyl-L-alanine amidase.
       0.456
SDI92432.1
Conserved repeat domain-containing protein.
    
  0.453
SDJ09592.1
Conserved repeat domain-containing protein.
    
  0.453
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.