STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOBPSine oculis-binding protein. (708 aa)    
Predicted Functional Partners:
SEC63
Translocation protein SEC63.
      
 0.698
Z169_10499
Cytochrome b5 reductase 4.
      
 0.595
QRSL1
Amidase domain-containing protein.
      
 0.446
Z169_00094
Uncharacterized protein C6orf203.
      
 0.446
SCML4
Sex comb on midleg-like 4.
      
 0.446
AIM1
Absent in melanoma 1 protein; Belongs to the beta/gamma-crystallin family.
      
 0.446
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.416
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.