STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM98BProtein FAM98B. (323 aa)    
Predicted Functional Partners:
Z169_15129
UPF0568 protein C14orf166.
    
 0.905
DDX1
ATP-dependent RNA helicase DDX1.
    
 0.904
RTCB
tRNA-splicing ligase RtcB.
    
 0.874
Z169_11753
Ashwin.
   
 0.845
TMEM65
Transmembrane protein 65.
 
      0.834
Z169_08776
Protein unc-79.
    
 0.749
KDM6A
Lysine-specific demethylase 6A.
    
 0.685
Z169_11736
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.519
Z169_03926
Uncharacterized protein C15orf41.
      
 0.508
ZBTB8OS
Protein archease.
    
 0.502
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.