STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD1BTB/POZ domain-containing protein 1. (354 aa)    
Predicted Functional Partners:
CUL3
Cullin-3; Belongs to the cullin family.
   
 0.638
UBE2F
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.574
COPS2
COP9 signalosome complex subunit 2.
   
  0.541
COPS3
COP9 signalosome complex subunit 3.
    
  0.534
UBA3
NEDD8-activating enzyme E1 catalytic subunit.
   
 
  0.534
Z169_12074
RING-box protein 1.
   
 0.516
COPS5
COP9 signalosome complex subunit 5.
    
  0.505
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.464
COPS8
COP9 signalosome complex subunit 8.
    
  0.451
COPS4
COP9 signalosome complex subunit 4.
    
  0.451
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.