STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOB1Protein Tob1. (326 aa)    
Predicted Functional Partners:
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.888
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.727
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.590
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 0.569
CNOT2
CCR4-NOT transcription complex subunit 2.
    
  0.534
RQCD1
Cell differentiation protein RCD1.
    
 0.487
CNOT6L
CCR4-NOT transcription complex subunit 6-like.
    
 0.409
CNOT6
CCR4-NOT transcription complex subunit 6.
    
 0.409
RERE
Arginine-glutamic acid dipeptide repeats protein.
      
 0.408
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.