STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QCA7Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
A0A5C3QH79
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.991
A0A5C3QP45
Sas10 C-terminal domain-containing protein.
   
 0.991
A0A5C3QRP3
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.991
A0A5C3R2L0
WD40-repeat-containing domain protein.
   
 0.990
A0A5C3QD69
Uncharacterized protein.
   
 
 0.989
A0A5C3Q2F9
WD40-repeat-containing domain protein.
   
 0.982
A0A5C3Q5B6
RNA helicase.
   
 0.981
A0A5C3QJH3
Bystin-domain-containing protein.
   
 
 0.966
A0A5C3QPD0
Uncharacterized protein.
   
 0.966
A0A5C3QVA2
U3 small nucleolar RNA-associated protein 6-domain-containing protein.
   
 0.966
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
Server load: low (26%) [HD]