STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QR18Golgi CORVET complex core vacuolar protein 8-domain-containing protein. (1468 aa)    
Predicted Functional Partners:
A0A5C3QWC9
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.989
A0A5C3QZK3
E3 ubiquitin-protein ligase PEP5.
    
 
 0.988
A0A5C3R2C0
Pep3/Vps18/deep orange family-domain-containing protein.
    
 
 0.988
A0A5C3QZD1
ATP binding protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.973
A0A5C3R0H1
CNH domain-containing protein.
   
 
 0.915
A0A5C3QJE1
CNH domain-containing protein.
   
 
 0.903
A0A5C3QRN6
Vps39_2 domain-containing protein.
   
 
 0.903
A0A5C3Q925
Alginate lyase-domain-containing protein.
    
 
 0.712
A0A5C3QLR7
Alginate lyase-domain-containing protein.
    
 
 0.712
A0A5C3QN72
GTP-binding protein RAB5.
    
 
 0.712
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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