STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QVA7Succinate-semialdehyde dehydrogenase. (494 aa)    
Predicted Functional Partners:
A0A5C3QSH6
Citrate synthase; Belongs to the citrate synthase family.
  
 0.928
A0A5C3R3Q4
Citrate synthase; Belongs to the citrate synthase family.
  
 0.928
A0A5C3Q2M9
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
 0.914
A0A5C3QXS0
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.909
A0A5C3Q3R4
Malate dehydrogenase.
   
 0.904
A0A5C3QW61
Malate dehydrogenase.
   
 0.904
A0A5C3R612
Fumarate hydratase.
    
 0.903
A0A5C3R1T0
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.899
A0A5C3R4M2
Mitochondrial NAD-dependent isocitrate dehydrogenase subunit 1.
 
  
 0.898
A0A5C3Q8W0
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.895
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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