STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3R640GTP-binding protein ypt5. (256 aa)    
Predicted Functional Partners:
A0A5C3QBT8
Phosphatidylinositol 3-kinase VPS34.
    
 0.924
A0A5C3QWG3
Uncharacterized protein.
    
 0.894
A0A5C3R8I5
FYVE-type domain-containing protein.
   
 0.894
A0A5C3QXS5
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.885
A0A5C3QCY0
Rab escort protein.
    
 0.848
A0A5C3QDZ7
P-loop containing nucleoside triphosphate hydrolase protein.
  
0.795
A0A5C3QN72
GTP-binding protein RAB5.
  
  
 
0.789
A0A5C3QKV0
Sec1 family-domain-containing protein; Belongs to the STXBP/unc-18/SEC1 family.
 
  
 0.786
A0A5C3R270
Rab-protein geranylgeranyltransferase.
    
 0.760
A0A5C3QKJ2
Ras-domain-containing protein.
  
0.744
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.